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HIV V3 Bodysite

Developed by damlab
Optimized model based on HIV-BERT for predicting the collection site of HIV V3 loop samples, with significantly improved accuracy compared to the original model
Downloads 257
Release Time : 3/2/2022

Model Overview

Predicts viral source tissue locations through HIV genomic sequences, suitable for cell origin research in latent viral reservoirs

Model Features

Tissue Localization Prediction
Can infer the final tissue localization of HIV viral particles in the human body
Cross-subtype Adaptability
Primarily optimized for subtype B but supports prediction for other HIV subtypes (additional training required)
Multi-label Output
Supports probability prediction of multiple non-exclusive sites for a single sequence

Model Capabilities

HIV Sequence Analysis
Tissue Site Probability Prediction
Biomarker Classification

Use Cases

Medical Research
Latent Reservoir Tracing
Tracks the latent locations of HIV virus in the body through V3 sequences
Treatment Plan Optimization
Develops targeted treatment strategies based on viral distribution characteristics
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